SeqbenchMcp SDK

SeqBench API client, generated from the OpenAPI spec.

REST API for DNA, RNA and protein sequence analysis, molecular cloning, primer design and CRISPR guide design.

Learn more about SeqBench API at seqbench.com/mcp.

This is an unofficial SDK for the SeqBench public API, generated by Voxgig with @voxgig/sdkgen. It is not affiliated with, endorsed by, or sponsored by the upstream API provider.

Learn more about Voxgig SDKs at voxgig.com/sdk.

Metadata kindly supplied by www.freepublicapis.com.

TypeScript, Python, PHP, Golang, Ruby, Lua SDKs, a CLI, an interactive REPL, and an MCP server for AI agents — all generated from one OpenAPI spec by @voxgig/sdkgen.

Entities, not endpoints

This SDK exposes the API as 85 semantic entities that you call directly, instead of assembling URL paths and query strings. See the Entities table below for the full list. Entities are Capitalised to mark them as the primary surface, each with the operations they support (load, create):

const client = new SeqbenchMcpSDK()
const alphafoldlookup = await client.AlphafoldLookup().create({
  accession: 'example',
  ok: 'example',
  provenance: {},
  result: {},
  tool: 'example',
})

Thinking in entities keeps the mental model small — for people and AI agents alike — rather than reasoning about raw HTTP routes and query parameters.

Offline unit testing

Every SDK ships a built-in test mode that swaps the HTTP transport for an in-memory mock, so your unit tests run fully offline — no server, no network, and no credentials:

TypeScript

const client = SeqbenchMcpSDK.test()
const batch = await client.Batch().load()
// batch is a bare Batch populated with mock data
console.log(batch)

Python

client = SeqbenchMcpSDK.test()
batch = client.Batch().load()
print(batch)

PHP

// Seed fixture data so offline calls resolve without a live server.
$client = SeqbenchMcpSDK::test([
    "entity" => ["batch" => ["test01" => []]],
]);
$batch = $client->Batch()->load();

Golang

client := sdk.Test()
result, err := client.Batch(nil).Load(
    nil, nil,
)

Ruby

# Seed fixture data so offline calls resolve without a live server.
client = SeqbenchMcpSDK.test({
  "entity" => { "batch" => { "test01" => {} } },
})
batch = client.Batch.load()

Lua

local client = sdk.test()
local result, err = client:Batch():load()

Packages

Quickstart

TypeScript

import { SeqbenchMcpSDK } from '@voxgig-sdk/seqbench-mcp'

const client = new SeqbenchMcpSDK({
  apikey: process.env.SEQBENCH_MCP_APIKEY,
})

See the TypeScript README for the full guide.

Surfaces

Use it from an AI agent (MCP)

The generated MCP server exposes every operation in this SDK as an MCP tool that Claude, Cursor or Cline can call directly. Build and register it:

cd go-mcp && go build -o seqbench-mcp-mcp .

Then add it to your agent’s MCP config (Claude Desktop, Cursor, etc.):

{
  "mcpServers": {
    "seqbench-mcp": {
      "command": "/abs/path/to/seqbench-mcp-mcp"
    }
  }
}

Entities

The API exposes 85 entities:

The operations available across these entities are load, create — see each entity’s own list above for exactly which it supports.

Quickstart in other languages

Python

import os
from seqbenchmcp_sdk import SeqbenchMcpSDK

client = SeqbenchMcpSDK({
    "apikey": os.environ.get("SEQBENCH_MCP_APIKEY"),
})

PHP

<?php
require_once 'seqbenchmcp_sdk.php';

$client = new SeqbenchMcpSDK([
    "apikey" => getenv("SEQBENCH_MCP_APIKEY"),
]);

Golang

import sdk "github.com/voxgig-sdk/seqbench-mcp-sdk/go"

client := sdk.NewSeqbenchMcpSDK(map[string]any{
    "apikey": os.Getenv("SEQBENCH_MCP_APIKEY"),
})

Ruby

require_relative "SeqbenchMcp_sdk"

client = SeqbenchMcpSDK.new({
  "apikey" => ENV["SEQBENCH_MCP_APIKEY"],
})

Lua

local sdk = require("seqbench-mcp_sdk")

local client = sdk.new({
  apikey = os.getenv("SEQBENCH_MCP_APIKEY"),
})

Direct and prepare

For endpoints the entity model doesn’t cover, use the low-level methods:

• direct(fetchargs) — build and send an HTTP request in one step.
• prepare(fetchargs) — build the request without sending it.

Both accept a map with path, method, params, query, headers, and body. See the How-to guides below.

How-to guides

Make a direct API call

When the entity interface does not cover an endpoint, use direct:

TypeScript:

const result = await client.direct({
  path: '/api/resource/{id}',
  method: 'GET',
  params: { id: 'example' },
})
if (result instanceof Error) {
  throw result
}
console.log(result.data)

Python:

result = client.direct({
    "path": "/api/resource/{id}",
    "method": "GET",
    "params": {"id": "example"},
})

PHP:

$result = $client->direct([
    "path" => "/api/resource/{id}",
    "method" => "GET",
    "params" => ["id" => "example"],
]);

Go:

result, err := client.Direct(map[string]any{
    "path":   "/api/resource/{id}",
    "method": "GET",
    "params": map[string]any{"id": "example"},
})
if err != nil {
    panic(err)
}
fmt.Println(result)

Ruby:

result = client.direct({
  "path" => "/api/resource/{id}",
  "method" => "GET",
  "params" => { "id" => "example" },
})

Lua:

local result, err = client:direct({
  path = "/api/resource/{id}",
  method = "GET",
  params = { id = "example" },
})

Advanced

Everyday use only needs the sections above. This explains the internals behind every call — relevant when writing custom features.

Every SDK call runs the same five-stage pipeline:

1. Point — resolve the API endpoint from the operation definition.
2. Spec — build the HTTP specification (URL, method, headers, body).
3. Request — send the HTTP request.
4. Response — receive and parse the response.
5. Result — extract the result data for the caller.

A feature hook fires at each stage (e.g. PrePoint, PreSpec, PreRequest), so features can inspect or modify the pipeline without forking the SDK.

Features

Pass custom features via the extend option at construction time.

Per-language documentation

• TypeScript
• Python
• PHP
• Golang
• Ruby
• Lua

Upstream API

This SDK is generated from the upstream OpenAPI specification. It is an unofficial client and is not affiliated with the API provider.

• Upstream API: https://seqbench.com

Security

Please report security issues to security@voxgig.com. See SECURITY.md. Do not open public issues for suspected vulnerabilities.

Generated from the SeqBench API OpenAPI spec by @voxgig/sdkgen.